TargetMine loads gene information from NCBI Gene. Read more
Query for genes:
v24r2
Data warehouse for drug discovery
NOTICE: The new BlueGenes interface is available now. https://targetmine.mizuguchilab.org/bluegenes .
v24r2
Data warehouse for drug discovery
Search TargetMine. Enter names, identifiers or keywords for genes, proteins, pathways, ontology terms, etc. (e.g. TNF, ADH1A_HUMAN, glucokinase, Alzheimer)
Enter a list of identifiers.
TargetMine integrates many types of biological annotations for human, rat and mouse. You can run flexible queries, export results and analyze lists of data. There is a tutorial on our web site describes some basics of TargetMine.
Genes |
Proteins |
Domain |
Structure |
Interactions |
Pathways |
Compounds |
TargetMine loads gene information from NCBI Gene. Read more
Query for genes:
TargetMine loads protein information from UniProt. Read more
Query for proteins:
TargetMine loads protein domain annotation from InterPro. Read more
Query for domain:
TargetMine loads protein structure data including PDB, SCOP and CATH. Read more
Query for structure:
TargetMine loads physical interactions from BioGRID and iRefindex. Read more
Query for interactions:
Upstream transcription factors Downstream targets PPI Network properties (Bottleneck and Hub) All target genes Species specific BIOGRID and iRefIndex PHYSICAL Interactions High confidence direct physical (HCDP) PPIs Functional targeting genes Gene X Gene BTargetMine loads pathway data from KEGG, Reactome and NCI pathway. Read more
Query for pathways:
The compound data in TargetMine comes from several data sources, including ChEMBL, PubChem, and KEGG. Read more
Query for compounds:
